While I doubt Bodhost will give you any problems, from my experience it's better to keep your domains in a registrar account simply due to security reasons.
In the event that your web hosting account was compromised, your domain could be tampered with as well. When both are separate, even if your web hosting account was hacked, you could still log onto your domain's registrar and temporarily point it somewhere else.
However, this could be bad too as if your account associated with your domain is hacked, your site will probably be tampered with as well as the hacker will either try to steal your domain or point the DNS somewhere else. And your web host company won't be able to help you as they don't have access to it, so you'd have to contact your registrar.
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