Make sure that you actually need to delete the database, as to resolve some problems you could just clear some tables in the database via phpMyAdmin. So let's say you have Wordpress installed onto it, but no longer want to use that site, rather than deleting the database you can just drop all the tables and it will make the database "clean" again. You can now use that database to either install another script or install a fresh copy of Wordpress for instance.
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